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Ancient DNA reveals the population interactions and a Neolithic patrilineal community in Northern Yangtze Region

PRJCA027754 Original Paper / DOI2025-09-3058 samples (study)

AI interpretationAI-generated

58 ancient genomes from Baligang reveal 4,200-year-old admixture and a 5,000-year-old patrilineal community.

This study sequenced 58 ancient genomes from Baligang, a settlement on the northern edge of the Middle Yangtze River. The samples span from the Middle Neolithic to the Late Bronze Age, covering cultures like Yangshao, Qujialing, Shijiahe, Longshan, and Zhou. The DNA shows that the population experienced multiple waves of admixture, with a major genetic influx from southern East Asians around 4,200 years ago. The authors also reconstructed family relationships from multi-generational burials and found evidence of a patrilineal community dating back 5,000 years.

Sample interpretation

Of the 58 genomes, 36 had resolvable Y-chromosome lineages. The most common paternal haplogroup was O-TY528043 (14 individuals), followed by O-MF374 and O-TY528046 (3 each). Maternal lineages were diverse, with D4b2b (6), B4a4 (3), and A6b (3) being the most frequent. The samples come from six cultural phases: Late Neolithic Yangshao (32), Middle Neolithic Yangshao (9), Longshan (6), Zhou (5), Shijiahe (4), and Qujialing (2). This temporal spread allows tracking genetic changes over time.

For genealogy enthusiasts

For ancestry enthusiasts, this study shows that the Baligang region was a genetic crossroads, with southern ancestry arriving by 4,200 BP. The dominance of O-TY528043 suggests a long-lasting paternal line. If you have East Asian ancestry, especially from the Yangtze region, these ancient genomes can help trace deep roots and population movements.

Abstract

The scarcity of ancient genomes of early rice cultivators has hindered our understanding of their genetic profiles and dynamic interactions with millet cultivators. In this study, we analyzed 58 ancient genomes from Baligang, a long-term settlement situated on the northern rim of the Middle Yangtze River Basin, spanning from the Middle Neolithic to the Late Bronze Age. This chronostratified genetic dataset offers comprehensive genomic insights into populations engaged in early rice cultivation, enhancing our understanding of East Asian demographic history. Our study revealed that Baligang experienced successive waves of admixture over time, with ~4,200 BP as a critical transition point, marked by a significant genomic influx of southern East Asian populations. We also identify the detailed kinship relations within multi-generational secondary burial and the existence of patrilineal communities dating back five millennia, offering fresh perspectives on early social structure in prehistoric China.

Samples & Data on TheYtree

58samples on site
36Y haplogroup resolved
1archaeological sites

Sample Map

Map tiles by TheYtree · dot size = number of samples

Paternal (Y-DNA) Haplogroups

HaplogroupSamples
O-TY528043 14
O-MF374 3
O-TY528046 3
O-F46 2
O-TY528044 2
O-Y38743 2
O-F1448 1
O-CTS2243 1
O-SK1728 1
N-F710 1
O-FGC71370 1
O-MF530428 1

Maternal (mtDNA) Haplogroups

Sample Highlights More samples →

SampleY-DNAmtDNACulture / Period
BLG-M76-2 O-F735 A6 BLG-MN-YS Yangshao 仰韶文化· 5909-5726 BP Middle Neolithic
BLG-M167 O-MF530428 D4b2b BLG-MN-YS Yangshao 仰韶文化· 6104-5766 BP Middle Neolithic
BLG-M174 O-MF374 A15a BLG-MN-YS Yangshao 仰韶文化· 6170-5910 BP Middle Neolithic
BLG-M180-1 O-F46 M9a BLG-MN-YS Yangshao 仰韶文化· 6166-5903 BP Middle Neolithic
BLG-M184 O-F46 F2 BLG-MN-YS Yangshao 仰韶文化· 5996-5759 BP Middle Neolithic
BLG-M224-3 O-MF374 B4a4 BLG-MN-YS Yangshao 仰韶文化· 5585-5331 BP Middle Neolithic
BLG-M231 O-MF374 A22 BLG-MN-YS Yangshao 仰韶文化· 5998-5769 BP Middle Neolithic
BLG-M261 O-F1448 M11a BLG-MN-YS Yangshao 仰韶文化· 5927-5750 BP Middle Neolithic
BLG-M13-20 O-TY528043 A15 BLG-LN-YS Yangshao 仰韶文化· Late Neolithic
BLG-M13-67 O-TY528046 D4b2b BLG-LN-YS Yangshao 仰韶文化· 5306-4980 BP Late Neolithic