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Genomic formation of lower Yellow River populations in the Han dynasty

PRJCA039714 Original Paper / DOI2025-08-2041 samples (study)

AI interpretationAI-generated

Western Han Shandong genomes reveal genetic continuity with Yellow River millet farmers.

Researchers sequenced 14 ancient genomes from the Wenshaobei site in Shandong, dating to the Western Han dynasty. These people were genetically distinct from early Neolithic Shandong hunter-gatherers but closely related to Middle Neolithic to Iron Age populations from the middle and lower Yellow River Basin. This suggests strong continuity with millet-farming societies, with only minor influence from southern rice farmers. Modern Shandong Han share this core ancestry but show slight differences, hinting at later migrations.

Sample interpretation

The study analyzed 41 samples from the Wenshaobei site. Y-chromosome haplogroups were resolved for 14 males, with Q-F1626 and C-Y178875 each appearing twice, and several O and N lineages once. Mitochondrial DNA was diverse: Y1b1 was most common (5 samples), followed by D4b2b, F2f, N9a1, and R11a. These lineages reflect a mix of northern and southern East Asian ancestries, consistent with the main genetic profile.

For genealogy enthusiasts

For ancestry enthusiasts, this confirms that Western Han Shandong people were direct descendants of Yellow River millet farmers, not local hunter-gatherers. Modern Shandong Han largely continue this legacy, but later migrations added minor southern and other influences. This helps trace your deep roots if you have Shandong ancestry.

Abstract

As a key region in the lower Yellow River Basin, Shandong Province is central to understanding the genetic history of East Asia, yet detailed ancient DNA data across its historical periods remain limited. Here, we newly generated 14 ancient genomes from the Wenshaobei site of the Western Han dynasty from Shandong Province. Genetic analyses, including principal component analysis (PCA), ADMIXTURE, and f-statistics, revealed that the Wenshaobei population was genetically distinct from Early Neolithic Shandong hunter-gatherers but closely aligned with Middle Neolithic to Iron Age populations from the middle and lower Yellow River Basin. This indicates strong genetic continuity with millet-farming societies from the middle Yellow River, supplemented by minor influences from southern rice-farming groups. While modern Han Chinese in Shandong share a core genetic foundation with ancient populations like Wenshaobei, subtle differences suggest recent admixture events, possibly linked to historical migrations across the Yellow River Basin.

Samples & Data on TheYtree

41samples on site
14Y haplogroup resolved
1archaeological sites

Sample Map

Map tiles by TheYtree · dot size = number of samples

Paternal (Y-DNA) Haplogroups

HaplogroupSamples
C-Y178875 2
Q-F1626 2
O-F837 1
O-F13 1
O-FT94148 1
O-MF1479 1
C-F3895 1
O-F504 1
O-MF36511 1
O-MF27975 1
O-F930 1
N-F1154 1

Maternal (mtDNA) Haplogroups

Sample Highlights More samples →

SampleY-DNAmtDNACulture / Period
M16 O-F13 B4a1c5 · 西汉延续至唐宋时期,以西汉为主
M22 N-F1154 — · 西汉延续至唐宋时期,以西汉为主
M25 O-F930 B4i1 · 西汉延续至唐宋时期,以西汉为主
M28 O-MF36511 M8 · 西汉延续至唐宋时期,以西汉为主
M34 C-F3895 D5b1b · 西汉延续至唐宋时期,以西汉为主
M36 O-MF1479 D4j · 西汉延续至唐宋时期,以西汉为主
M39 O-FT94148 F2f · 西汉延续至唐宋时期,以西汉为主
M5 O-F837 R11a · 西汉延续至唐宋时期,以西汉为主
M55 Q-F1626 B5b2c · 西汉延续至唐宋时期,以西汉为主
M58 Q-F1626 D4b2b · 西汉延续至唐宋时期,以西汉为主