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Ancient genomes provide insight into the Paleolithic-to-Neolithic transition in northern East Asia

PRJCA042904 Original Paper / DOI2026-03-043 samples (study)

AI interpretationAI-generated

11,000-year-old Beijing genomes reveal a deep northern East Asian lineage.

This study reports ancient DNA from the Donghulin site in western Beijing, dating to about 11,000–9,000 years ago, right at the Paleolithic-to-Neolithic transition. The authors recovered three mitochondrial genomes and two whole genomes. They found a previously unknown deep northern East Asian lineage represented by an ~11,000-year-old individual, and they detected genetic shifts at the site over roughly 2,000 years of post-glacial warming. These results show that northern East Asia had its own complex, diverse path into the Neolithic.

Sample interpretation

The site sample includes four individuals from Donghulin. Mitochondrial haplogroups are D4h (2 individuals), G4 (1), and one unresolved. Only one Y-chromosome haplogroup was resolved: N-Y3059. These small numbers mean the sample is limited, but it still captures both mitochondrial and Y-chromosome diversity at this key transitional site.

For genealogy enthusiasts

For ancestry fans, this adds an early northern East Asian branch to the human family tree. It suggests the Neolithic transition in northern East Asia was not a simple spread from one source, but a local, complex process worth watching in future ancient DNA work.

Abstract

The Paleolithic-to-Neolithic transition (PNT), which coincided with the Holocene warming trend after the last Ice Age, significantly transformed human cultural and genetic landscapes around the world. However, the genetic dynamics of this transitional period in northern East Asia have yet to be fully investigated. Here, we reported mitochondrial genomes from three individuals and genome-wide data from two individuals from the Donghulin site located in western Beijing, China (∼11–9 thousand years ago). This represents the earliest genetic evidence, together with archaeological context, of Neolithization in northern East Asia. We identify a newly discovered deep northern East Asian (nEA) lineage represented by the ∼11,000-year-old DHL_M1, which diverged early in the Late Pleistocene. We also identify the genetic changes at the Donghulin site over approximately 2,000 years during the post-glacial warming period. These findings highlight the genetic diversity and complex population dynamics during the Neolithization process in northern East Asia, indicating a unique PNT trajectory in this region.

Samples & Data on TheYtree

4samples on site
1Y haplogroup resolved
1archaeological sites

Sample Map

Map tiles by TheYtree · dot size = number of samples

Paternal (Y-DNA) Haplogroups

HaplogroupSamples
N-Y3059 1

Maternal (mtDNA) Haplogroups

Sample Highlights More samples →

SampleY-DNAmtDNACulture / Period
DHL_M2 N-Y3059 G4 · 9,263-9,027 cal BP (8,190±35 BP)